BME1323: Medical Statistics and Data Analysis (Schedule)

Syllabus

Who / When / Where
Instructor: Zhiyu Wan
Teaching Assistant: Feiyang Zhou
Semester: Fall 2026
Location & Time:
– SIST 1A106, 15:00-16:40 on Mondays
– SIST 1D108, 10:15-11:55 on Wednesdays (Even Week)
Office Hours: Upon request, Location: BME Building, Room 228

Schedule

(Note: This schedule is tentative and subject to change.)

WeekChapterTeaching ContentsReadingsAssignments
Week 1, Monday Sept 14, 15:00-16:40
Lecture 1 (PDF)
I. Course Introduction (a)Course introduction.

Introduction to medical statistics.

Concepts of statistics.
(Optional:
1.《Fundamentals of Biostatistics》Ch.1.
2.《医学统计学(高教版)》Ch.1.
3.《医学统计学(人卫版)》Ch.1.)
/
Week 2, Monday Sept 21, 15:00-16:40
Lecture 2 (PDF)
I. Course Introduction (b)Descriptive statistics.(Optional:
1.《Fundamentals of Biostatistics》Ch.2.
2.《医学统计学(人卫版)》Ch.2.)
/
Week 2, Wednesday Sept 23, 10:15-11:50
Lecture 3 (PDF)
II. Data Visualization (a)In-class quiz.
Introduction to R.
Week 3, Monday Sept 28, 15:00-16:40
Lecture 4 (PDF) Practice
II. Data Visualization (b)Introduction to Python.
Week 4, Saturday Oct 10, 10:15-11:50
Lecture 5 (PDF)
III. Probability and Probability Distributions (a)Bayesian inference.

Receiver operating characteristic (ROC) curves.
(Optional:
1.《Fundamentals of Biostatistics》Ch.3.)
Week 5, Monday Oct 12, 15:00-16:40
Lecture 6 (PDF)
III. Probability and Probability Distributions (b)Discrete probability distributions.

Continuous probability distributions.
(Optional:
1.《Fundamentals of Biostatistics》Chs.4&5.
2.《医学统计学(人卫版)》Ch.6.
3.《医学统计学(高教版)》Ch.2.)
Week 6, Monday Oct 19, 15:00-16:40
Lecture 7 (PDF)
IV. Estimation and Hypothesis Testing (a)Randomized experimental design and sampling.

Point estimations.

Confidence intervals.
(Optional:
1.《Fundamentals of Biostatistics》Ch.6.)
Week 6, Wednesday Oct 21, 10:15-11:50
Lecture 8 (PDF)
IV. Estimation and Hypothesis Testing (b)One-Sample Inference.

Statistical power and sample size estimation.
(Optional:
1.《Fundamentals of Biostatistics》Ch.7)
HW #1 Posted.
Week 7, Monday Oct 26, 15:00-16:40
Lecture 9 (PDF)
IV. Estimation and Hypothesis Testing (c)Two-sample inference.

Statistical experimental design approaches.
(Optional:
1.《Fundamentals of Biostatistics》Ch.8)
Week 8, Monday Nov 2, 15:00-16:40
Lecture 10 (PDF)
V. Nonparametric TestsRank-sum tests.

Chi-square tests.
HW #2 Posted.
Week 8, Wednesday Nov 4, 10:15-11:50
Lecture 11 (PDF)
VI. Analysis of Variance One-way analysis of variance.

Two-way analysis of variance.

Multiple comparisons in analysis of variance.

2 × 2 factorial design.

Tests for homogeneity of variance.
HW #1 Due.
Week 9, Monday Nov 9, 15:00-16:40
Lecture 12 (PDF)
Case Studies in Biomedical Engineering (including Guest Lecture)Real-world studies.
Healthcare big data.

Data security and privacy protection.

Guest lecture.
HW #2 Due.
HW #3 Posted.
Week 10, Monday Nov 16, 15:00-16:40
Lecture 13 (PDF)
VII. Data Classification (a)K-nearest neighbors (KNN) algorithm.

Support vector machines.

Announce course project topics.
Week 10, Wednesday Nov 18, 10:15-11:50
Lecture 14 (PDF)
VII. Data Classification (b)Naive bayes.

Decision trees and random forests.

Complete team formation.
HW #3 Due.
HW #4 Posted.
Week 11, Monday Nov 23, 15:00-16:40
Lecture 15 (PDF)
VIII. Regression Analysis (a)Linear regression.

Regularized regression.
Week 12, Monday Nov 30, 15:00-16:40
Lecture 16 (PDF)
VIII. Regression Analysis (b)Polynomial regression.

Logistic regression.
HW #4 Due.
HW #5 Posted.
Week 12, Wednesday Dec 2, 10:15-11:50
Lecture 17 (PDF)
IX. Supervised Learning (a)Introduction to neural networks.

Convolutional neural networks.

Stochastic gradient descent.

Complete project topic selection.
Week 13, Monday Dec 7, 15:00-16:40
Lecture 18 (PDF)
IX. Supervised Learning (b)Recurrent neural networks.

Transformers.

Generative models.
Week 14, Monday Dec 14, 15:00-16:40
Lecture 19 (PDF)
X. Unsupervised Learning (a)Hierarchical Clustering.

Gaussian Mixture Models.

Submission of team project proposals.
Project Proposal Report Due at 23:59 on Dec 14.
Week 14, Wednesday Dec 16, 10:15-11:50
Lecture 20 (PDF)
X. Unsupervised Learning (b)K-means clustering.

Self-supervised learning models.
Week 15, Monday Dec 21, 15:00-16:40
Lecture 21 (PDF)
XI. Dimensionality ReductionCorrelation analysis.

Principal component analysis.
HW #5 Due at 15:00 on Dec 21.
Week 16, Monday Dec 28, 15:00-16:40
Lecture 22 (PDF)
XII. Time-Series AnalysisSurvival analysis.

Hidden Markov models.

Markov chain Monte Carlo.
Final Project Presentation Due at 23:59 on Dec 29.
Week 16, Wednesday Dec 30, 10:15-11:50Course Project PresentationGroup presentations and feedbacks.Final Project Report (Research Paper) Due at 23:59 on Jan 8.